- Work Packages
- WP 1Management & Coordination
- WP 2 (OSD)Ocean Sampling Day
- WP 3Oceanography & Environmental Data
- WP 4Standards and Interoperability
- WP 5Bioinformatics & Data Integration
- WP 6Exploring Ecosystems Biology
- WP 7Function and Biotechnology
- WP 8Intellectual Property (IP) Management for Marine Bioprospecting
- WP 9Dissemination & Outreach
- Public DeliverablesAll Micro B3's public deliverables
- Micro B3 Industry Expert WorkshopMarch 30/31, 2015
- Micro B3/OSD Analysis WorkshopMarch 09-13, 2015
- Micro B3 Stakeholder WorkshopSeptember 25/26, 2014
- Micro B3 Summer School in Crete 2014
- Marine Metagenomics Bioinformatics
- Micro B3 Industry expert workshop
- EU-US Training 2013
- Micro B3 Statistics Training 2013
- MG4U Bioinformatics Training 2013
- Bioinformatics Training 2012
- EU-US Training 2012
Ocean Sampling Day
Introduction to Ocean Sampling Day (OSD)
The Ocean Sampling Day (OSD) is a simultaneous sampling campaign of the world’s oceans and will take place on the summer solstice (June 21st) in the year 2014. These cumulative samples, related in time, space and environmental parameters, will provide insights into fundamental rules describing microbial diversity and function and will contribute to the blue economy through the identification of novel, ocean-derived biotechnologies. We expect that these data will provide a reference data set for generations of experiments to follow in the coming decade. It could also function as starting point for regularly coordinated future OSDs.
The OSD Citizen Science project (MyOSD)
We would also like to engage the public by joining our OSD Citizen Science campaign (MyOSD). Collecting important environmental data like latitude, longitude, temperature, wind speed and others will help the scientist to get a better understanding of the world’s oceans. Click here for more information how to join MyOSD.
OSD pilot studies and current status of OSD
As part of ramping up the official Ocean Sampling Day (OSD) in 2014 we are running pilot-OSD studies to help establish the co-ordination (creation of the OSD sites network), logistics (sampling, shipping and processing), bioinformatics (metadata capture, standards, storage, analysis and data exchange) and policies (data policy for OSD, ABS/MTA/DTA) required to run the main event. The standardized procedure ensures a high level of consistency between data points across Europe and beyond. The first pilot studies took place on Wednesday June 20th, 2012 (summer solstice) and Friday December 21st (winter solstice). Due to the very positive reaction of all parties, we have decided to continue to sample each summer and winter solstice until June 21st 2014.
As of June 2014 185 sampling sites have confirmed their participation in OSD on June 21st, 2014. Click here for a full list of particpants and a dynamic map.
Call for participation in Ocean Sampling Day
The Micro B3 project is leading an open call to participate in Ocean Sampling Day hoping to invite more external participants to join the main OSD event on June 21st 2014 (deadline for application is 1st of May 2014). If you are associated with a marine research site, research cruise or a sailor/skipper and would like to participate in the OSD 2014 (or prior pilot activities) we would kindly ask you to express your interest using this link:
Expression of Interest:
How to contact us:
Don’t hesitate to contact the OSD team by sending an email to email@example.com if you have any question or need more information or assistance.
Specific updates about OSD and reports from the sites participating in OSD can be found on the blog:
Follow us on Twitter: https://twitter.com/Micro_B3
The official Hashtag is #osd2014
Like us on Facebook: https://www.facebook.com/microb3osd
Ocean Sampling Day Handbook 2.0 (released June 2014)
The OSD project builds on past efforts including the Global Ocean Survey (GOS), the International Census of Marine Microbes (ICoMM), and Tara Oceans. In addition OSD is being put together in collaboration with the Genomic Observatories Network (GOs Network), the Earth Microbiome Project (EMP), and the Global Genome Initiative (GGI).